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Research
Papers.

Please consult arXiv preprints for updates on published articles (including corrected typos).

Click on the title for the hyperlink to the original version.

Preprints (under review)

Connected components in networks with higher-order interactions
 Gyeong-Gyun Ha (하경균), Izaak Neri, & Alessia Annibale.  
https://arxiv.org/abs/2504.03060

2024

Liquid Hopfield model: retrieval and localization in multicomponent liquid mixtures 
R. Braz Teixeira, G. Carugno, I. Neri, & P. Sartori.  In: Proc. Natl. Acad. Sci. U.S.A. 121, e2320504121 (2024)
https://arxiv.org/abs/2310.18853

Local sign stability and its implications for spectra of sparse random graphs and stability of ecosystems
P. Valigi, I. Neri, & C. Cammarota.  In: Journal of Physics: Complexity 5, 015017 (2024)
https://arxiv.org/abs/2303.09897
 

Methods and conversations in (post)modern thermodynamics 
F. Avanzini, et al.  In: SciPost Physics Lecture Notes 80 (2024)
https://arxiv.org/abs/2311.01250  

Multicyclic Norias: A First-Transition Approach to Extreme Values of the Currents
M. Polettini, & I. Neri.  In: Journal of Statistical Physics 191, 35 (2024)
https://arxiv.org/abs/2208.02888

Quad clustering coefficients for networks with higher order interactions
 Gyeong-Gyun Ha (하경균), Izaak Neri, & Alessia Annibale.  In: Chaos 34, 043102 (2024)
https://arxiv.org/abs/2311.08563

2023

Extreme value statistics of edge currents in Markov jump processes and their use for entropy production estimation
I. Neri, & M. Polettini. In: SciPost Physics 14, 131 (2023)
https://arxiv.org/abs/2208.02839

Martingales for Physicists: a Treatise on Stochastic Thermodynamics and Beyond
E. Roldán, I. Neri, R. Chetrite, S. Gupta, S. Pigolotti, F. Jülicher, & K. Sekimoto.  In: Advances in Physics 72, 1-258 (2023).
https://arxiv.org/abs/2210.09983

Antagonistic interactions can stabilise fixed points in heterogeneous linear dynamical systems
S. Cure, & I. Neri. In: SciPost Physics 14, 093 (2023) 
https://arxiv.org/abs/2112.13498

 

Optimal information usage in binary sequential hypothesis testing
M. Dörpinghaus, I. Neri, E. Roldán, & F. Jülicher.  In: Theory of Probability and its Applications 68, 77-87 (2023)

2022

Estimating entropy production rates with first-passage processes
I. Neri. In: Journal of Physics A: Mathematical and Theoretical 55, 304005 (2022)
 https://arxiv.org/abs/2207.06745.

Instabilities of complex fluids with partially structured and partially random interactions
G. Carugno, I. Neri, & P. Vivo.  In : Physical Biology. 19, 056001 (2022)
https://arxiv.org/abs/2109.03164

Universal trade-off relation between speed, uncertainty, and dissipation in nonequilibrium stationary states
I. Neri.  In: SciPost Physics 12, 139 (2022)
https://arxiv.org/abs/2103.15007

Dynamical systems on large networks with predator-prey interactions are stable and exhibit oscillations
A. M. Mambuca, C. Cammarota, & I. Neri. In: Physical Review E 105, 014305 (2022)
https://arxiv.org/abs/2009.11211.

2021

Modelling the effect of ribosome mobility on the rate of protein synthesis
O. Dauloudet, I. Neri, J-C. Walter, J. Dorignac, F. Geniet, & A. Parmeggiani. In: European Physical Journal E. 44, 19 (2021)
https://arxiv.org/abs/2009.14533

Localisation and Universality of eigenvectors in directed random graphs
F. L. Metz, & I. Neri.  In: Physical Review Letters 126, 040604 (2021)
https://arxiv.org/abs/2007.13672

2020

Linear Stability Analysis of Large Dynamical Systems on Random Directed Graphs
I. Neri, & F.L. Metz.  In: Physical Review Research 2, 033313 (2020)
https://arxiv.org/abs/1908.07092

Universal Transient Behavior in Large Dynamical Systems on Networks
W. Tarnowski., I. Neri, & P. Vivo.  In: Physical Review Research 2, 023333.(2020) 
https://arxiv.org/abs/1906.10634

Second Law of Thermodynamics at Stopping Times
I. Neri. In: Physical Review Letters 124, 040601 (2020)
https://arxiv.org/abs/2002.01265

2019

Spectral Theory of Sparse Non-Hermitian Random Matrices
F. L. Metz, I. Neri, & T. Rogers.  In: Journal Of Physics A-Mathematical And Theoretical. 52, 434003 (2019)
https://arxiv.org/abs/1811.10416

Integral Fluctuation Relations for Entropy Production at Stopping Times
I. Neri, E. Roldán, S. Pigolotti, & F. Jülicher. In: Journal of Statistical Mechanics: Theory and Experiment 2019, 104006 (2019)
https://arxiv.org/abs/1903.08115

Extreme Reductions of Entropy in An Electronic Double Dot
S. Singh, E. Roldán, I. Neri, I. M. Khaymovich, D. S. Golubev, V.  F. Maisi, J. T. Peltonen, F. Jülicher, & J. P. Pekola.  In : Physical Review B 99, 115422 (2019)
https://arxiv.org/abs/1712.01693

2018

Martingale Theory for Housekeeping Heat
R. Chétrite, S. Gupta, I. Neri & E. Roldán.  In: Europhysics Letters 124, 60006 (2018)
https://arxiv.org/abs/1810.09584

2017

Generic Properties of Stochastic Entropy Production
S. Pigolotti., I. Neri, E. Roldán, & F. Jülicher.  In : Physical Review Letters 119, 140604 (2017)
https://arxiv.org/abs/1704.04061

Statistics of Infima and Stopping Times of Entropy Production and Applications to Active Molecular Processes
I. Neri, E. Roldán, & F. Jülicher.  In: Physical Review X 7, 011019 (2017)
https://arxiv.org/abs/1604.04159

An information theoretic analysis of sequential decision-making
M. Dörpinghaus, E. Roldán, I. Neri, H. Meyr & F.  Jülicher.  In : IEEE International Symposium on Information Theory (ISIT), 3050-3054 (2017)

2016

Eigenvalue Outliers of Non-Hermitian Random Matrices with a Local Tree Structure
I. Neri, & F. L. Metz.  In : Physical Review Letters 117, 224101 (2016)
 https://arxiv.org/abs/1611.07993

2015

Decision Making in the Arrow of Time
E. Roldán, I. Neri, M. Dörpinghaus, H. Meyr, & F. Jülicher.  In: Physical Review Letters 115, 250602 (2015)
https://arxiv.org/abs/1508.02018

2014

Motor protein traffic regulation by supply–demand balance of resources
L. Ciandrini, I. Neri, J-C. Walter, O. Dauloudet, & A. Parmeggiani.  In: Physical Biology 11, 056006 (2014)
https://arxiv.org/abs/1408.2945

On the equivalence of Ising models on 'small-world' networks and LDPC codes on channels with memory
I. Neri & N. S. Skantzos.  In: Journal of Physics A: Mathematical and Theoretical 47, 385002 (2014)
https://arxiv.org/abs/0907.0775

Modelling Collective Cytoskeletal Transport and Intracellular Traffic
A. Parmeggiani, I. Neri & N. Kern.  In: The Impact of Applications on Mathematics, pp. 1-25. Springer, Tokyo, 2014

2013

Exclusion Processes on Networks as Models for Cytoskeletal Transport
I. Neri, N. Kern & A. Parmeggiani.  In: New Journal of Physics 15, 085005 (2013)
https://arxiv.org/abs/1304.1943

On the spectra of large sparse graphs with cycles
D. Bollé, F.L. Metz & I. Neri. In: Spectral Analysis, Differential Equations and Mathematical Physics: A Festschrift in Honor of Fritz Gesztesy's 60th Birthday, H. Holden et al. (eds), Proceedings of Symposia in Pure Mathematics, vol. 87, Amer. Math. Soc., pp. 35-58 (2013)
https://arxiv.org/abs/1206.1512

Modeling Cytoskeletal Traffic: An Interplay between Passive Diffusion and Active Transport
I. Neri, N. Kern, & A. Parmeggiani.  In: Phyiscal Review Letters 110, 098102 (2013)
https://arxiv.org/abs/1212.0437

2012

Spectra of Sparse non-Hermitian Random Matrices: an Analytical Solution
I. Neri, & F. L. Metz.  In: Physical Review Letters 109, 030602 (2012)
https://arxiv.org/abs/1205.0702

2011

Totally Asymmetric Simple Exclusion Process on Networks
I. Neri, N. Kern & A. Parmeggiani.  In: Physical Review Letters 107, 068702 (2011)
https://arxiv.org/abs/1105.2905.

Spectra of Regular Graphs with Loops
F. L. Metz, I. Neri & D. Bollé
.  In: Physical Review E 84, 055101 (2011)
https://arxiv.org/abs/1107.4127

2010

Localization Transition in Symmetric Random Matrices
F. L. Metz, I. Neri & D. Bollé.  In: Physical Review E 82, 031135 (2010)
https://arxiv.org/abs/1005.3712

The Phase Diagram of Lévy Spin Glasses
I. Neri, F. L. Metz, & D. Bollé
.  In: Journal of Statistical Mechanics: Theory and Experiment 2010, P01010 (2010)
https://arxiv.org/abs/0910.1231
 

2009

The Cavity Approach to Parallel Dynamics of Ising Spins on a Graph
I. Neri & D. Bollé
.  In: Journal of Statistical Mechanics: Theory and Experiment 2009, P08009 (2009)
https://arxiv.org/abs/0905.3260
 

2008

Gallager error-correcting codes for binary asymmetric channels
I. Neri, N. S. Skantzos & D. Bollé
.  In: Journal of Statistical Mechanics: Theory and Experiment 2008, P10018 (2008)
https://arxiv.org/abs/0803.2580

© 2024 by Izaak Neri PhD Proudly created by Yilan Luan

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